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Ilya Kupershmidt Phones & Addresses

  • Cupertino, CA
  • 188 Buchanan St APT 313, San Francisco, CA 94102
  • 888 7Th St #108, San Francisco, CA 94107
  • 205 Portola Ave, Los Altos, CA 94022 (650) 941-4969
  • 857 Laverne Way, Los Altos, CA 94022 (650) 941-4969
  • San Mateo, CA
  • Mountain View, CA
  • Palo Alto, CA

Resumes

Resumes

Ilya Kupershmidt Photo 1

Ilya Kupershmidt

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Location:
San Francisco, CA
Industry:
Biotechnology
Work:
Nextbio
Skills:
Big Data
Genomics
Biotechnology
Sequencing
Cell Culture
Entrepreneurship
Genetics
Bioinformatics
Lifesciences
High Throughput Screening
Molecular Biology
Dna
Product Management
Personalized Medicine
Pharmaceutical Industry
Start Ups
Drug Discovery
Molecular Imaging
Scientific Computing
Patents
User Interface Design
Saas
Elisa
Cancer
Molecular Diagnostics
Proteomics
Dna Sequencing
Microarray
Ilya Kupershmidt Photo 2

Ilya Kupershmidt

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Location:
San Francisco, CA

Publications

Us Patents

System And Method For Scientific Information Knowledge Management

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US Patent:
8275737, Sep 25, 2012
Filed:
Dec 18, 2006
Appl. No.:
11/641539
Inventors:
Ilya Kupershmidt - San Mateo CA, US
Qiaojuan Jane Su - San Jose CA, US
Francois Andry - Menlo Park CA, US
Assignee:
NextBio - Santa Clara CA
International Classification:
G06F 17/00
G06N 5/02
US Classification:
706 60, 706 50, 706 45
Abstract:
The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure.

Directional Expression-Based Scientific Information Knowledge Management

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US Patent:
8364665, Jan 29, 2013
Filed:
Sep 19, 2008
Appl. No.:
12/234435
Inventors:
Qiaojuan Jane Su - San Jose CA, US
Ilya Kupershmidt - San Francisco CA, US
Assignee:
NextBio - Santa Clara CA
International Classification:
G06F 7/00
G06F 17/00
US Classification:
707723, 707758, 707805, 707954
Abstract:
The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. In particular, aspects of the invention relate to integrating, organizing, navigating and querying “directional” data, such as gene expression profiles.

Categorization And Filtering Of Scientific Data

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US Patent:
20090222400, Sep 3, 2009
Filed:
Mar 4, 2009
Appl. No.:
12/398107
Inventors:
Ilya Kupershmidt - San Francisco CA, US
Qiaojuan Jane Su - San Jose CA, US
Qingdi Liu - San Jose CA, US
Satnam Alag - Santa Clara CA, US
Suman Sundaresh - Cupertino CA, US
Assignee:
NextBio - Cupertino CA
International Classification:
G06N 7/02
G06N 5/02
US Classification:
706 52, 706 54, 706 53
Abstract:
The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. According to various embodiments, methods, systems and interfaces for associating experimental data, features and groups of data related by structure and/or function with chemical, medical and/or biological terms in an ontology or taxonomy are provided. According to various embodiments, methods, systems and interfaces for filtering data by data source information are provided, allowing dynamic navigation through large amounts of data to find the most relevant results for a particular query.

Sequence-Centric Scientific Information Management

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US Patent:
20100318528, Dec 16, 2010
Filed:
Jun 8, 2010
Appl. No.:
12/796545
Inventors:
Ilya Kupershmidt - San Francisco CA, US
Qiaojuan Jane Su - San Jose CA, US
Assignee:
NextBio - Cupertino CA
International Classification:
G06F 17/30
US Classification:
707756, 707769, 707E17044, 707E17014
Abstract:
According to various embodiments, aspects of the invention provide a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from diverse sequencing technologies as well as different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure. The methods, systems and apparatuses described enable combining orthogonal types of data and available public knowledge to elucidate mechanisms governing normal development, disease progression, as well as susceptibility of individuals to disease or response to drug treatments.

Patient-Centric Information Management

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US Patent:
20130166320, Jun 27, 2013
Filed:
Sep 17, 2012
Appl. No.:
13/621756
Inventors:
Ilya Kupershmidt - San Francisco CA, US
Qiaojuan Jane Su - San Jose CA, US
Assignee:
NEXTBIO - Santa Clara CA
International Classification:
G06F 19/00
G06Q 50/22
US Classification:
705 3
Abstract:
Provided herein are methods, systems and apparatus for querying and interpreting data derived from individual patients. The methods, systems and apparatus described herein can be used in clinical and research settings. Included are methods, systems and apparatus for identifying similar patients, germline DNA analysis, somatic tissue analysis, pathway-based therapy selection, prioritizing drugs, and querying a database to return patients and clinical attributes.

System And Method For Scientific Information Knowledge Management

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US Patent:
20130166599, Jun 27, 2013
Filed:
Aug 17, 2012
Appl. No.:
13/588526
Inventors:
Ilya Kupershmidt - San Francisco CA, US
Qiaojuan Jane Su - San Jose CA, US
Francois Andry - Menlo Park CA, US
Assignee:
NEXTBIO - Santa Clara CA
International Classification:
G06F 17/30
US Classification:
707792
Abstract:
The present invention relates to methods, systems and apparatus for capturing, integrating, organizing, navigating and querying large-scale data from high-throughput biological and chemical assay platforms. It provides a highly efficient meta-analysis infrastructure for performing research queries across a large number of studies and experiments from different biological and chemical assays, data types and organisms, as well as systems to build and add to such an infrastructure.

Wikipedia

Nextbio

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Ilya Kupershmidt (VP of Product Management) Dr. Satnam Alag ... It was co-founded by Saeid Akhtari, Ilya Kupershmidt and Mostafa Ronaghi in 2004 and based ...

Ilya V Kupershmidt from Cupertino, CA, age ~49 Get Report